Biological Physics

Authors and titles for recent submissions

• Fri, 21 Jun 2024
• Wed, 19 Jun 2024
• Tue, 18 Jun 2024
• Mon, 17 Jun 2024
• Fri, 14 Jun 2024

See today's new changes

Fri, 21 Jun 2024 (showing 8 of 8 entries )

[1] arXiv:2406.14350 [pdf, html, other]

Title: A first-principles geometric model for dynamics of motor-driven centrosomal asters

Yuan-Nan Young, Vicente Gomez Herrera, Helena Z. Huan, Reza Farhadifar, Michael J. Shelley

Comments: 50 pages (double-spaced), eight figures in main text, and four figures in the supplemental material

Subjects: Biological Physics (physics.bio-ph); Adaptation and Self-Organizing Systems (nlin.AO); Subcellular Processes (q-bio.SC)

[2] arXiv:2406.14196 [pdf, html, other]

Title: Formation of motile cell clusters in heterogeneous model tumors: the role of cell-cell alignment

Quirine J.S. Braat, Cornelis Storm, Liesbeth M.C. Janssen

Comments: 11 pages, 6 figures

Subjects: Biological Physics (physics.bio-ph)

[3] arXiv:2406.14256 (cross-list from cond-mat.soft) [pdf, html, other]

Title: Microscopic and stochastic simulations of chemically active droplets

Roxanne Berthin, Jacques Fries, Marie Jardat, Vincent Dahirel, Pierre Illien

Subjects: Soft Condensed Matter (cond-mat.soft); Statistical Mechanics (cond-mat.stat-mech); Biological Physics (physics.bio-ph)

[4] arXiv:2406.14062 (cross-list from q-bio.QM) [pdf, html, other]

Title: An agent-based model of behaviour change calibrated to reversal learning data

Roben Delos Reyes, Hugo Lyons Keenan, Cameron Zachreson

Comments: 23 pages, 5 figures

Subjects: Quantitative Methods (q-bio.QM); Biological Physics (physics.bio-ph); Computation (stat.CO)

[5] arXiv:2406.14037 (cross-list from physics.chem-ph) [pdf, html, other]

Title: Delving into the Catalytic Mechanism of Molybdenum Cofactors: A Novel Coupled Cluster Study

Marta Gałyńska, Matheus Morato F. de Moraes, Paweł Tecmer, Katharina Boguslawski

Comments: 6 figures, 2 tables

Subjects: Chemical Physics (physics.chem-ph); Biological Physics (physics.bio-ph); Computational Physics (physics.comp-ph)

[6] arXiv:2406.13644 (cross-list from math.NA) [pdf, html, other]

Title: Kinetic Monte Carlo methods for three-dimensional diffusive capture problems in exterior domains

Alan E. Lindsay, Andrew J. Bernoff

Comments: 32 pages, 10 figures

Subjects: Numerical Analysis (math.NA); Analysis of PDEs (math.AP); Biological Physics (physics.bio-ph); Quantitative Methods (q-bio.QM)

[7] arXiv:2406.13504 (cross-list from cond-mat.stat-mech) [pdf, html, other]

Title: Self-organized transport in noisy dynamic networks

Frederic Folz, Kurt Mehlhorn, Giovanna Morigi

Comments: 12 pages, 10 figures

Subjects: Statistical Mechanics (cond-mat.stat-mech); Adaptation and Self-Organizing Systems (nlin.AO); Biological Physics (physics.bio-ph); Neurons and Cognition (q-bio.NC)

[8] arXiv:2406.12986 (cross-list from quant-ph) [pdf, other]

Title: Simulating spin biology using a digital quantum computer: Prospects on a near-term quantum hardware emulator

Pedro H. Alvarez, Farhan T. Chowdhury, Luke D. Smith, Trevor J. Brokowski, Clarice D. Aiello, Daniel R. Kattnig, Marcos C. de Oliveira

Comments: 10 pages, 9 figures

Subjects: Quantum Physics (quant-ph); Biological Physics (physics.bio-ph)

Wed, 19 Jun 2024

No updates for this time period.

Tue, 18 Jun 2024 (showing 5 of 5 entries )

[9] arXiv:2406.10585 [pdf, html, other]

Title: Complementarity between Brillouin signature and Scholte wave for controlled elasticity in fibrillated collagen medium for culture cell

Ahmed Hamraoui, Océane Sénépart, Laurent Belliard

Comments: 10 pages, 5 figures

Subjects: Biological Physics (physics.bio-ph)

[10] arXiv:2406.11465 (cross-list from cond-mat.soft) [pdf, html, other]

Title: Integer defects, flow localization, and bistability on curved active surfaces

Rushikesh Shinde, Raphaël Voituriez, Andrew Callan-Jones

Subjects: Soft Condensed Matter (cond-mat.soft); Biological Physics (physics.bio-ph)

[11] arXiv:2406.10936 (cross-list from nlin.PS) [pdf, html, other]

Title: Statistical description of mobile oscillators in embryonic pattern formation

Koichiro Uriu, Luis G. Morelli

Comments: 19 pages, 9 figures, 1 table

Subjects: Pattern Formation and Solitons (nlin.PS); Biological Physics (physics.bio-ph); Cell Behavior (q-bio.CB)

[12] arXiv:2406.10739 (cross-list from q-bio.PE) [pdf, other]

Title: A stochastic field theory for the evolution of quantitative traits in finite populations

Ananda Shikhara Bhat

Comments: Main text is 36 pages long (with references) and contains two figures; Supplementary material is 35 pages long (with references) and contains one figure

Subjects: Populations and Evolution (q-bio.PE); Statistical Mechanics (cond-mat.stat-mech); Probability (math.PR); Biological Physics (physics.bio-ph)

[13] arXiv:2406.10355 (cross-list from cond-mat.stat-mech) [pdf, html, other]

Title: Flow of Energy and Information in Molecular Machines

Matthew P. Leighton, David A. Sivak

Comments: Review article. 19 pages, 5 figures

Subjects: Statistical Mechanics (cond-mat.stat-mech); Biological Physics (physics.bio-ph)

Mon, 17 Jun 2024 (showing 5 of 5 entries )

[14] arXiv:2406.09902 [pdf, other]

Title: Flight-Scope: microscopy with microfluidics in microgravity

Thomas Wareing, Alexander Stokes, Katrina Crompton, Koren Murphy, Jack Dawson, Yusuf Furkan Ugurluoglu, Connor Richardson, Hongquan Li, Manu Prakash, Adam J. M. Wollman

Comments: 22 pages, 5 figures

Subjects: Biological Physics (physics.bio-ph)

[15] arXiv:2406.09670 [pdf, other]

Title: Delayed phosphate release can highly improve energy efficiency of muscle contraction

Jiaxiang Xu, Jiangke Tao, Bin Chen

Subjects: Biological Physics (physics.bio-ph); Soft Condensed Matter (cond-mat.soft)

[16] arXiv:2406.10084 (cross-list from physics.pop-ph) [pdf, other]

Title: Is it Truly Necessary for Bicycle Power Meters to Rapidly Sample Angular Velocity?

Jack Renshaw

Subjects: Popular Physics (physics.pop-ph); Signal Processing (eess.SP); Biological Physics (physics.bio-ph)

[17] arXiv:2406.09700 (cross-list from cs.RO) [pdf, html, other]

Title: Jointed Tails Enhance Control of Three-dimensional Body Rotation

Xun Fu, Bohao Zhang, Ceri J. Weber, Kimberly L. Cooper, Ram Vasudevan, Talia Y. Moore

Subjects: Robotics (cs.RO); Biological Physics (physics.bio-ph)

[18] arXiv:2406.09442 (cross-list from physics.med-ph) [pdf, other]

Title: An insertable glucose sensor using a compact and cost-effective phosphorescence lifetime imager and machine learning

Artem Goncharov, Zoltan Gorocs, Ridhi Pradhan, Brian Ko, Ajmal Ajmal, Andres Rodriguez, David Baum, Marcell Veszpremi, Xilin Yang, Maxime Pindrys, Tianle Zheng, Oliver Wang, Jessica C. Ramella-Roman, Michael J. McShane, Aydogan Ozcan

Comments: 24 Pages, 4 Figures

Subjects: Medical Physics (physics.med-ph); Machine Learning (cs.LG); Applied Physics (physics.app-ph); Biological Physics (physics.bio-ph)

Fri, 14 Jun 2024 (showing 3 of 3 entries )

[19] arXiv:2406.08964 [pdf, other]

Title: Kinetics-Optimized Enhanced Sampling Using Mean First Passage Times

Tiejun Wei, Balint Dudas, Edina Rosta

Subjects: Biological Physics (physics.bio-ph)

[20] arXiv:2406.09340 (cross-list from quant-ph) [pdf, other]

Title: Prospects for NMR Spectral Prediction on Fault-Tolerant Quantum Computers

Justin E. Elenewski, Christina M. Camara, Amir Kalev

Subjects: Quantum Physics (quant-ph); Biological Physics (physics.bio-ph); Chemical Physics (physics.chem-ph)

[21] arXiv:2406.08886 (cross-list from q-bio.BM) [pdf, html, other]

Title: Bistability in filamentous actin through monomer-sequestration of an effector species

Panayiotis Foteinopoulos, Bela M. Mulder

Subjects: Biomolecules (q-bio.BM); Biological Physics (physics.bio-ph)